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Amphibian fungal panzootic causes catastrophic and ongoing loss of biodiversity

Ben C. Scheele https://orcid.org/0000-0001-7284-629X [email protected], Frank Pasmans https://orcid.org/0000-0003-3160-503X, Lee F. Skerratt https://orcid.org/0000-0003-3471-7512, Lee Berger https://orcid.org/0000-0001-9227-5439, An Martel, Wouter Beukema https://orcid.org/0000-0002-5839-7683, Aldemar A. Acevedo https://orcid.org/0000-0002-4729-2093, Patricia A. Burrowes https://orcid.org/0000-0002-3085-6681, Tamilie Carvalho https://orcid.org/0000-0001-7300-2777, Alessandro Catenazzi https://orcid.org/0000-0002-3650-4783, Ignacio De la Riva https://orcid.org/0000-0001-5064-4507, Matthew C. Fisher https://orcid.org/0000-0002-1862-6402, Sandra V. Flechas, Claire N. Foster https://orcid.org/0000-0001-5061-6055, Patricia Frías-Álvarez https://orcid.org/0000-0002-2518-194X, Trenton W. J. Garner https://orcid.org/0000-0002-0336-9706, Brian Gratwicke https://orcid.org/0000-0002-7332-4060, Juan M. Guayasamin https://orcid.org/0000-0003-0098-978X, Mareike Hirschfeld https://orcid.org/0000-0001-8666-1931, Jonathan E. Kolby https://orcid.org/0000-0002-8241-4711, Tiffany A. Kosch https://orcid.org/0000-0001-5158-5748, Enrique La Marca, David B. Lindenmayer https://orcid.org/0000-0002-4766-4088, Karen R. Lips https://orcid.org/0000-0002-2719-1551, Ana V. Longo https://orcid.org/0000-0002-5112-1246, Raúl Maneyro https://orcid.org/0000-0003-3440-8701, Cait A. McDonald https://orcid.org/0000-0001-8291-6087, Joseph Mendelson III https://orcid.org/0000-0001-5620-377X, Pablo Palacios-Rodriguez https://orcid.org/0000-0001-5626-5540, Gabriela Parra-Olea https://orcid.org/0000-0002-0175-925X, Corinne L. Richards-Zawacki https://orcid.org/0000-0002-4212-041X, Mark-Oliver Rödel https://orcid.org/0000-0002-1666-195X, Sean M. Rovito https://orcid.org/0000-0002-4713-9654, Claudio Soto-Azat https://orcid.org/0000-0001-9201-7886, Luís Felipe Toledo https://orcid.org/0000-0002-4929-9598, Jamie Voyles https://orcid.org/0000-0002-0073-5790, Ché Weldon https://orcid.org/0000-0001-6716-0787, Steven M. Whitfield, Mark Wilkinson https://orcid.org/0000-0002-9459-8976, Kelly R. Zamudio https://orcid.org/0000-0001-5107-6206, and Stefano Canessa https://orcid.org/0000-0002-0932-826X
Science29 Mar 2019Vol 363, Issue 6434pp. 1459-1463DOI: 10.1126/science.aav0379

The demise of amphibians?

Rapid spread of disease is a hazard in our interconnected world. The chytrid fungus Batrachochytrium dendrobatidis was identified in amphibian populations about 20 years ago and has caused death and species extinction at a global scale. Scheele et al. found that the fungus has caused declines in amphibian populations everywhere except at its origin in Asia (see the Perspective by Greenberg and Palen). A majority of species and populations are still experiencing decline, but there is evidence of limited recovery in some species. The analysis also suggests some conditions that predict resilience.
Science, this issue p. 1459; see also p. 1386

Abstract

Anthropogenic trade and development have broken down dispersal barriers, facilitating the spread of diseases that threaten Earth’s biodiversity. We present a global, quantitative assessment of the amphibian chytridiomycosis panzootic, one of the most impactful examples of disease spread, and demonstrate its role in the decline of at least 501 amphibian species over the past half-century, including 90 presumed extinctions. The effects of chytridiomycosis have been greatest in large-bodied, range-restricted anurans in wet climates in the Americas and Australia. Declines peaked in the 1980s, and only 12% of declined species show signs of recovery, whereas 39% are experiencing ongoing decline. There is risk of further chytridiomycosis outbreaks in new areas. The chytridiomycosis panzootic represents the greatest recorded loss of biodiversity attributable to a disease.
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Supplementary Material

Summary

Materials and Methods
Figs. S1 and S2
Tables S1 to S4
References (31494)
Data S1

Resources

File (aav0379__scheele_data_s1.xlsx)
File (aav0379_scheele_data_s1_original.xlsx)
File (aav0379_scheele_sm.pdf)
Correction (23 March 2020): The Supplementary Materials for this article were updated on 23 March 2020. Minor amendments have been made to referencing and supporting details in Data S1. Additional references are now included in Data S1. The reference list that appears in the HTML version of the paper and the Supplementary Materials file has been updated to include sources cited in the main text, Supplementary Materials, and Data S1. The main text and results remain unaltered.

References and Notes

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Volume 363Issue 643429 March 2019
Pages: 1459 - 1463

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Received: 9 August 2018
Accepted: 6 February 2019

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Fenner School of Environment and Society, Australian National University, Canberra, ACT 2601, Australia.
National Environmental Science Programme, Threatened Species Recovery Hub, Canberra, ACT 2601, Australia.
One Health Research Group, Melbourne Veterinary School, The University of Melbourne, Werribee, VIC 3030, Australia.
Wildlife Health Ghent, Department of Pathology, Bacteriology, and Avian Diseases, Faculty of Veterinary Medicine, Ghent University, B-9820 Merelbeke, Belgium.
One Health Research Group, Melbourne Veterinary School, The University of Melbourne, Werribee, VIC 3030, Australia.
One Health Research Group, Melbourne Veterinary School, The University of Melbourne, Werribee, VIC 3030, Australia.
An Martel
Wildlife Health Ghent, Department of Pathology, Bacteriology, and Avian Diseases, Faculty of Veterinary Medicine, Ghent University, B-9820 Merelbeke, Belgium.
Wildlife Health Ghent, Department of Pathology, Bacteriology, and Avian Diseases, Faculty of Veterinary Medicine, Ghent University, B-9820 Merelbeke, Belgium.
Programa de Doctorado en Ciencias Biológicas, Laboratorio de Biología Evolutiva, Pontificia Universidad Católica de Chile, Avenida Libertador Bernardo O’Higgins 340, Santiago, Chile.
Grupo de Investigación en Ecología y Biogeografía, Universidad de Pamplona, Barrio El Buque, Km 1, Vía a Bucaramanga, Pamplona, Colombia.
Department of Biology, University of Puerto Rico, P.O. Box 23360, San Juan, Puerto Rico.
Laboratório de História Natural de Anfíbios Brasileiros (LaHNAB), Departamento de Biologia Animal, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, Brazil.
Department of Biological Sciences, Florida International University, Miami, FL 33199, USA.
Museo Nacional de Ciencias Naturales-CSIC, C/ José Gutiérrez Abascal 2, Madrid 28006, Spain.
MRC Centre for Global Infectious Disease Analysis, School of Public Health, Imperial College London, London W2 1PG, UK.
Sandra V. Flechas
Department of Biological Sciences, Universidad de los Andes, Bogotá, Colombia.
Instituto de Investigación de Recursos Biológicos Alexander von Humboldt, Sede Venado de Oro, Paseo Bolívar 16-20, Bogotá, Colombia.
Fenner School of Environment and Society, Australian National University, Canberra, ACT 2601, Australia.
Patricia Frías-Álvarez https://orcid.org/0000-0002-2518-194X
One Health Research Group, Melbourne Veterinary School, The University of Melbourne, Werribee, VIC 3030, Australia.
Institute of Zoology, Zoological Society London, Regents Park, London NW1 4RY, UK.
Unit for Environmental Sciences and Management, North-West University, Potchefstroom 2520, South Africa.
Smithsonian National Zoological Park and Conservation Biology Institute, Washington, DC 20008, USA.
Universidad San Francisco de Quito USFQ, Colegio de Ciencias Biológicas y Ambientales COCIBA, Instituto de Investigaciones Biológicas y Ambientales BIOSFERA, Laboratorio de Biología Evolutiva, Campus Cumbayá, Quito, Ecuador.
Centro de Investigación de la Biodiversidad y Cambio Climático (BioCamb), Ingeniería en Biodiversidad y Cambio Climático, Facultad de Medio Ambiente, Universidad Tecnológica Indoamérica, Calle Machala y Sabanilla, Quito, Ecuador.
Department of Biology, Colorado State University, Fort Collins, CO 80523, USA.
Museum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Invalidenstr. 43, Berlin 10115, Germany.
One Health Research Group, Melbourne Veterinary School, The University of Melbourne, Werribee, VIC 3030, Australia.
Honduras Amphibian Rescue and Conservation Center, Lancetilla Botanical Garden and Research Center, Tela, Honduras.
The Conservation Agency, Jamestown, RI 02835, USA.
One Health Research Group, Melbourne Veterinary School, The University of Melbourne, Werribee, VIC 3030, Australia.
AL Rae Centre for Genetics and Breeding, Massey University, Palmerston North 4442, New Zealand.
Enrique La Marca
School of Geography, Faculty of Forestry Engineering and Environmental Sciences, University of Los Andes, Merida, Venezuela.
Fenner School of Environment and Society, Australian National University, Canberra, ACT 2601, Australia.
National Environmental Science Programme, Threatened Species Recovery Hub, Canberra, ACT 2601, Australia.
Department of Biology, University of Maryland, College Park, MD 20742, USA.
Department of Biology, University of Florida, Gainesville, FL 32611, USA.
Laboratorio de Sistemática e Historia Natural de Vertebrados. Facultad de Ciencias, Universidad de la República. Igua 4225, CP 11400, Montevideo, Uruguay.
Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY 14853, USA.
Zoo Atlanta, Atlanta, GA 30315, USA.
School of Biological Sciences, Georgia Institute of Technology, Atlanta, GA 30332, USA.
Pablo Palacios-Rodriguez https://orcid.org/0000-0001-5626-5540
Department of Biological Sciences, Universidad de los Andes, Bogotá, Colombia.
Departamento de Zoología, Instituto de Biología, Universidad Nacional Autónoma de México, Mexico City, México.
Corinne L. Richards-Zawacki https://orcid.org/0000-0002-4212-041X
Department of Biological Sciences, University of Pittsburgh, Pittsburgh, PA 15260, USA.
Museum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Invalidenstr. 43, Berlin 10115, Germany.
Unidad de Genómica Avanzada (Langebio), Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, km 9.6 Libramiento Norte Carretera Irapuato-León, Irapuato, Guanajuato CP36824, México.
Centro de Investigación para la Sustentabilidad, Facultad de Ciencias de la Vida, Universidad Andres Bello, Santiago 8370251, Chile.
Laboratório de História Natural de Anfíbios Brasileiros (LaHNAB), Departamento de Biologia Animal, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, Brazil.
Department of Biology, University of Nevada, Reno, NV 89557, USA.
Unit for Environmental Sciences and Management, North-West University, Potchefstroom 2520, South Africa.
Steven M. Whitfield
Zoo Miami, Conservation and Research Department, Miami, FL 33177, USA.
Florida International University School of Earth, Environment, and Society, 11200 SW 8th St., Miami, FL 33199, USA.
Department of Life Sciences, The Natural History Museum, London SW7 5BD, UK.
Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY 14853, USA.
Wildlife Health Ghent, Department of Pathology, Bacteriology, and Avian Diseases, Faculty of Veterinary Medicine, Ghent University, B-9820 Merelbeke, Belgium.

Notes

*Corresponding author. Email: [email protected]

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Science
Volume 363|Issue 6434
29 March 2019
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Accepted:6 February 2019
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