Marine Tubeworm Metamorphosis Induced by Arrays of Bacterial Phage Tail–Like Structures
Big MACs
Tubeworms are important marine benthic species that encrust rocks and contribute to fouling of man-made objects, such as ships' hulls and drilling well heads. Like most marine invertebrates, the larval stages of tubeworms are free-swimming, but the cues for larval settlement and the triggers for metamorphosis are mysterious. Shikuma et al. (p. 529, published online 9 January) experimented on larval settlement by the tubeworm, Hydroides elegans, which needs to associate with a biofilm-forming bacterium, Pseudoalteromonas luteoviolacea, before settlement can occur. The bacterium was found to express metamorphosis-associated contractile structures (MACs) in large and structurally elaborate arrays that allow the tubeworm larvae to develop.
Abstract
Many benthic marine animal populations are established and maintained by free-swimming larvae that recognize cues from surface-bound bacteria to settle and metamorphose. Larvae of the tubeworm Hydroides elegans, an important biofouling agent, require contact with surface-bound bacteria to undergo metamorphosis; however, the mechanisms that underpin this microbially mediated developmental transition have been enigmatic. Here, we show that a marine bacterium, Pseudoalteromonas luteoviolacea, produces arrays of phage tail–like structures that trigger metamorphosis of H. elegans. These arrays comprise about 100 contractile structures with outward-facing baseplates, linked by tail fibers and a dynamic hexagonal net. Not only do these arrays suggest a novel form of bacterium-animal interaction, they provide an entry point to understanding how marine biofilms can trigger animal development.
Get full access to this article
View all available purchase options and get full access to this article.
Already a Subscriber?Sign In
Supplementary Material
Summary
Materials and Methods
Figs. S1 to S10
Tables S1 to S4
Movies S1 to S8
Resources
File (1246794.shikuma.sm.revision1.pdf)
File (1246794s1.mov)
File (1246794s2.mov)
File (1246794s3.mp4)
File (1246794s4.mp4)
File (1246794s5.mov)
File (1246794s6.mov)
File (1246794s7.mov)
File (1246794s8.mov)
File (shikuma.sm.pdf)
References and Notes
1
M. G. Hadfield, V. J. Paul, Marine Chemical Ecology, J. B. McClintock and B. J. Baker, Eds. (CRC Press, Boca Raton, FL, 2001), pp. 431.
2
Hadfield M. G., Biofilms and marine invertebrate larvae: What bacteria produce that larvae use to choose settlement sites. Annu. Rev. Mar. Sci. 3, 453–470 (2011).
3
Food and Agriculture Organization of the United Nations, The State of World Fisheries and Aquaculture 2012 (FAO, Rome, 2012).
4
Schultz M. P., Bendick J. A., Holm E. R., Hertel W. M., Economic impact of biofouling on a naval surface ship. Biofouling 27, 87–98 (2011).
5
McFall-Ngai M., Hadfield M. G., Bosch T. C., Carey H. V., Domazet-Lošo T., Douglas A. E., Dubilier N., Eberl G., Fukami T., Gilbert S. F., Hentschel U., King N., Kjelleberg S., Knoll A. H., Kremer N., Mazmanian S. K., Metcalf J. L., Nealson K., Pierce N. E., Rawls J. F., Reid A., Ruby E. G., Rumpho M., Sanders J. G., Tautz D., Wernegreen J. J., Animals in a bacterial world, a new imperative for the life sciences. Proc. Natl. Acad. Sci. U.S.A. 110, 3229–3236 (2013).
6
Nedved B. T., Hadfield M. G., Hydroides elegans (Annelida: Polychaeta): A model for biofouling research. Marine Indust.l Biofoul. 4, 203–217 (2009).
7
Huang Y., Callahan S., Hadfield M. G., Recruitment in the sea: Bacterial genes required for inducing larval settlement in a polychaete worm. Sci. Rep. 2, 228 (2012).
8
Huang S. Y., Hadfield M. G., Composition and density of bacterial biofilms determine larval settlement of the polychaete Hydroides elegans. Mar. Ecol. Prog. Ser. 260, 161–172 (2003).
9
Holmström C., Kjelleberg S., Marine Pseudoalteromonas species are associated with higher organisms and produce biologically active extracellular agents. FEMS Microbiol. Ecol. 30, 285–293 (1999).
10
Michel-Briand Y., Baysse C., The pyocins of Pseudomonas aeruginosa. Biochimie 84, 499–510 (2002).
11
Uratani Y., Hoshino T., Pyocin R1 inhibits active transport in Pseudomonas aeruginosa and depolarizes membrane potential. J. Bacteriol. 157, 632–636 (1984).
12
Basler M., Pilhofer M., Henderson G. P., Jensen G. J., Mekalanos J. J., Type VI secretion requires a dynamic contractile phage tail-like structure. Nature 483, 182–186 (2012).
13
Hurst M. R., Glare T. R., Jackson T. A., Cloning Serratia entomophila antifeeding genes—a putative defective prophage active against the grass grub Costelytra zealandica. J. Bacteriol. 186, 5116–5128 (2004).
14
Yang G., Dowling A. J., Gerike U., ffrench-Constant R. H., Waterfield N. R., Photorhabdus virulence cassettes confer injectable insecticidal activity against the wax moth. J. Bacteriol. 188, 2254–2261 (2006).
15
Pukatzki S., Ma A. T., Sturtevant D., Krastins B., Sarracino D., Nelson W. C., Heidelberg J. F., Mekalanos J. J., Identification of a conserved bacterial protein secretion system in Vibrio cholerae using the Dictyostelium host model system. Proc. Natl. Acad. Sci. U.S.A. 103, 1528–1533 (2006).
16
Penz T., Schmitz-Esser S., Kelly S. E., Cass B. N., Müller A., Woyke T., Malfatti S. A., Hunter M. S., Horn M., Comparative genomics suggests an independent origin of cytoplasmic incompatibility in Cardinium hertigii. PLOS Genet. 8, e1003012 (2012).
17
Penz T., Horn M., Schmitz-Esser S., The genome of the amoeba symbiont “Candidatus Amoebophilus asiaticus” encodes an afp-like prophage possibly used for protein secretion. Virulence 1, 541–545 (2010).
18
Pédelacq J. D., Cabantous S., Tran T., Terwilliger T. C., Waldo G. S., Engineering and characterization of a superfolder green fluorescent protein. Nat. Biotechnol. 24, 79–88 (2006).
19
Pilhofer M., Ladinsky M. S., McDowall A. W., Jensen G. J., Bacterial TEM: New insights from cryo-microscopy. Methods Cell Biol. 96, 21–45 (2010).
20
Köhler T., Donner V., van Delden C., Lipopolysaccharide as shield and receptor for R-pyocin-mediated killing in Pseudomonas aeruginosa. J. Bacteriol. 192, 1921–1928 (2010).
21
Gebhart D., Williams S. R., Bishop-Lilly K. A., Govoni G. R., Willner K. M., Butani A., Sozhamannan S., Martin D., Fortier L. C., Scholl D., Novel high-molecular-weight, R-type bacteriocins of Clostridium difficile. J. Bacteriol. 194, 6240–6247 (2012).
22
Leiman P. G., Arisaka F., van Raaij M. J., Kostyuchenko V. A., Aksyuk A. A., Kanamaru S., Rossmann M. G., Morphogenesis of the T4 tail and tail fibers. Virol. J. 7, 355 (2010).
23
Cerritelli M. E., Wall J. S., Simon M. N., Conway J. F., Steven A. C., Stoichiometry and domainal organization of the long tail-fiber of bacteriophage T4: A hinged viral adhesin. J. Mol. Biol. 260, 767–780 (1996).
24
Tran C., Hadfield M. G., Larvae of Pocillopora damicornis (Anthozoa) settle and metamorphose in response to surface-biofilm bacteria. Mar. Ecol. Prog. Ser. 433, 85–96 (2011).
25
Huggett M. J., Williamson J. E., de Nys R., Kjelleberg S., Steinberg P. D., Larval settlement of the common Australian sea urchin Heliocidaris erythrogramma in response to bacteria from the surface of coralline algae. Oecologia 149, 604–619 (2006).
26
Unabia C. R. C., Hadfield M. G., Role of bacteria in larval settlement and metamorphosis of the polychaete Hydroides elegans. Mar. Biol. 133, 55–64 (1999).
27
Lau S. C., Mak K. K., Chen F., Qian P.-Y., Bioactivity of bacterial strains isolated from marine biofilms in Hong Kong waters for the induction of larval settlement in the marine polychaete Hydroides elegans. Mar. Ecol. Prog. Ser. 226, 301–310 (2002).
28
Persson O. P., Pinhassi J., Riemann L., Marklund B. I., Rhen M., Normark S., González J. M., Hagström A., High abundance of virulence gene homologues in marine bacteria. Environ. Microbiol. 11, 1348–1357 (2009).
29
Anisimova M., Gascuel O., Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative. Syst. Biol. 55, 539–552 (2006).
30
J. Sambrook, E. F. Fritsch, T. Maniatis, Molecular Cloning: A Laboratory Manual (Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, ed. 2, 1989).
31
Young J. W., Locke J. C., Altinok A., Rosenfeld N., Bacarian T., Swain P. S., Mjolsness E., Elowitz M. B., Measuring single-cell gene expression dynamics in bacteria using fluorescence time-lapse microscopy. Nat. Protoc. 7, 80–88 (2011).
32
Tivol W. F., Briegel A., Jensen G. J., An improved cryogen for plunge freezing. Microsc. Microanal. 14, 375–379 (2008).
33
Iancu C. V., Tivol W. F., Schooler J. B., Dias D. P., Henderson G. P., Murphy G. E., Wright E. R., Li Z., Yu Z., Briegel A., Gan L., He Y., Jensen G. J., Electron cryotomography sample preparation using the Vitrobot. Nat. Protoc. 1, 2813–2819 (2007).
34
Zheng S. Q., Keszthelyi B., Branlund E., Lyle J. M., Braunfeld M. B., Sedat J. W., Agard D. A., UCSF tomography: An integrated software suite for real-time electron microscopic tomographic data collection, alignment, and reconstruction. J. Struct. Biol. 157, 138–147 (2007).
35
Kremer J. R., Mastronarde D. N., McIntosh J. R., Computer visualization of three-dimensional image data using IMOD. J. Struct. Biol. 116, 71–76 (1996).
36
Amat F., Moussavi F., Comolli L. R., Elidan G., Downing K. H., Horowitz M., Markov random field based automatic image alignment for electron tomography. J. Struct. Biol. 161, 260–275 (2008).
37
Nicastro D., Schwartz C., Pierson J., Gaudette R., Porter M. E., McIntosh J. R., The molecular architecture of axonemes revealed by cryoelectron tomography. Science 313, 944–948 (2006).
38
Punta M., Coggill P. C., Eberhardt R. Y., Mistry J., Tate J., Boursnell C., Pang N., Forslund K., Ceric G., Clements J., Heger A., Holm L., Sonnhammer E. L., Eddy S. R., Bateman A., Finn R. D., The Pfam protein families database. Nucleic Acids Res. 40, (D1), D290–D301 (2012).
39
Finn R. D., Clements J., Eddy S. R., HMMER web server: Interactive sequence similarity searching. Nucleic Acids Res. 39(suppl. 2), W29–W37 (2011).
40
Li W., Godzik A., Cd-hit: A fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics 22, 1658–1659 (2006).
41
Abascal F., Zardoya R., Posada D., ProtTest: Selection of best-fit models of protein evolution. Bioinformatics 21, 2104–2105 (2005).
42
Guindon S., Dufayard J. F., Lefort V., Anisimova M., Hordijk W., Gascuel O., New algorithms and methods to estimate maximum-likelihood phylogenies: Assessing the performance of PhyML 3.0. Syst. Biol. 59, 307–321 (2010).
43
Letunic I., Bork P., Interactive Tree Of Life v2: Online annotation and display of phylogenetic trees made easy. Nucleic Acids Res. 39(suppl. 2), W475–W478 (2011).
44
Gauthier M. J., Validation of the Name Alteromonas-Luteoviolacea. Int. J. Syst. Bacteriol. 32, 82–86 (1982).
45
Gauthier G., Gauthier M., Christen R., Phylogenetic analysis of the genera Alteromonas, Shewanella, and Moritella using genes coding for small-subunit rRNA sequences and division of the genus Alteromonas into two genera, Alteromonas (emended) and Pseudoalteromonas gen. nov., and proposal of twelve new species combinations. Int. J. Syst. Bacteriol. 45, 755–761 (1995).
46
Lee A. K., Falkow S., Constitutive and inducible green fluorescent protein expression in Bartonella henselae. Infect. Immun. 66, 3964–3967 (1998).
Information & Authors
Information
Published In

Science
Volume 343 | Issue 6170
31 January 2014
31 January 2014
Copyright
Copyright © 2014, American Association for the Advancement of Science.
Article versions
You are viewing the most recent version of this article.
Submission history
Received: 3 October 2013
Accepted: 23 December 2013
Published in print: 31 January 2014
Acknowledgments
We thank B. Pernet for help with locating and identifying tubeworms and for giving us the algal strain used in this work; A. McDowall for help with EM; Y. Huang, who created the StrR-strain (7); A. Asahina and S. Wilbur for laboratory assistance; J. Levine for help with time-lapse microscopy; J. Ricci for help with phylogenetic analyses; and members of the Newman group for discussions and comments on the manuscript. The Howard Hughes Medical Institute, Z. Yu, and J. de la Cruz are acknowledged for providing access to the FEI Titan Krios at Janelia Farm and support in data collection. N.J.S. was supported by a California Institute of Technology (Caltech) Division of Biology Postdoctoral Fellowship. This collaboration was supported by the Caltech Center for Environmental Microbiology Interactions, the Howard Hughes Medical Institute (D.K.N. and G.J.J.), Office of Naval Research grants N00014-08-1-0413 and N00014-05-1-0579 (M.G.H.), NIH grant GM094800B (G.J.J.), and a gift from the Gordon and Betty Moore Foundation (Caltech). D.K.N. and G.J.J. are Investigators of the Howard Hughes Medical Institute. Strains obtained from the American Type Culture Collection listed in table S2 (ATCC 33492, ATCC 14393, ATCC 15057). DNA sequences encoding for mac, T6SS, and bacteriocin-2 genes are deposited under GenBank accession numbers KF724687, KF724688, and KF724689, respectively. Subtomogram averages were deposited in the Electron Microscopy Data Bank (accession numbers EMD-2543, EMD-2544, and EMD-2545). Author contributions: All authors designed research. N.J.S., M.P. and G.L.W. performed research. All authors wrote the paper.
Authors
Metrics & Citations
Metrics
Article Usage
Altmetrics
Citations
Export citation
Select the format you want to export the citation of this publication.
Cited by
- Designing a MOF-based slippery lubricant-infused porous surface with dual functional anti-fouling strategy, Journal of Colloid and Interface Science, 607, (1424-1435), (2022).https://doi.org/10.1016/j.jcis.2021.09.052
- First evidence of virus-like particles in the bacterial symbionts of Bryozoa, Scientific Reports, 11, 1, (2021).https://doi.org/10.1038/s41598-020-78616-4
- The Impact of Quorum Sensing on the Modulation of Phage-Host Interactions, Journal of Bacteriology, 203, 11, (2021).https://doi.org/10.1128/JB.00687-20
- Computational prediction of secreted proteins in gram-negative bacteria, Computational and Structural Biotechnology Journal, 19, (1806-1828), (2021).https://doi.org/10.1016/j.csbj.2021.03.019
- Two Distinct Bacterial Biofilm Components Trigger Metamorphosis in the Colonial Hydrozoan Hydractinia echinata, mBio, 12, 3, (2021).https://doi.org/10.1128/mBio.00401-21
- Chromosome-level genome assembly of the hard-shelled mussel Mytilus coruscus , a widely distributed species from the temperate areas of East Asia , GigaScience, 10, 4, (2021).https://doi.org/10.1093/gigascience/giab024
- Draft Genome Sequences of Two Bacteria from the Roseobacter Group , Microbiology Resource Announcements, 10, 30, (2021).https://doi.org/10.1128/MRA.00390-21
- The extracellular contractile injection system is enriched in environmental microbes and associates with numerous toxins, Nature Communications, 12, 1, (2021).https://doi.org/10.1038/s41467-021-23777-7
- Coral Probiotics: Premise, Promise, Prospects, Annual Review of Animal Biosciences, 9, 1, (265-288), (2021).https://doi.org/10.1146/annurev-animal-090120-115444
- Complete genome sequence of Metabacillus sp. cB07, a bacterium inducing settlement and metamorphosis of coral larvae, Marine Genomics, (100877), (2021).https://doi.org/10.1016/j.margen.2021.100877
- See more
Loading...
View Options
Get Access
Log in to view the full text
AAAS login provides access to Science for AAAS Members, and access to other journals in the Science family to users who have purchased individual subscriptions.
- Become a AAAS Member
- Activate your AAAS ID
- Purchase Access to Other Journals in the Science Family
- Account Help
Log in via OpenAthens.
Log in via Shibboleth.
More options
Register for free to read this article
As a service to the community, this article is available for free. Login or register for free to read this article.
Buy a single issue of Science for just $15 USD.
View options
PDF format
Download this article as a PDF file
Download PDF





