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Sequencing of Culex quinquefasciatus Establishes a Platform for Mosquito Comparative Genomics

Science
1 Oct 2010
Vol 330, Issue 6000
pp. 86-88

Closing the Vector Circle

The genome sequence of Culex quinquefasciatus offers a representative of the third major genus of mosquito disease vectors for comparative analysis. In a major international effort, Arensburger et al. (p. 86) uncovered divergences in the C. quinquefasciatus genome compared with the representatives of the other two genera Aedes aegypti and Anopheles gambiae. The main difference noted is the expansion of numbers of genes, particularly for immunity, oxidoreductive functions, and digestive enzymes, which may reflect specific aspects of the Culex life cycle. Bartholomay et al. (p. 88) explored infection-response genes in Culex in more depth and uncovered 500 immune response-related genes, similar to the numbers seen in Aedes, but fewer than seen in Anopheles or the fruit fly Drosophila melanogaster. The higher numbers of genes were attributed partly to expansions in those encoding serpins, C-type lectins, and fibrinogen-related proteins, consistent with greater immune surveillance and associated signaling needed to monitor the dangers of breeding in polluted, urbanized environments. Transcriptome analysis confirmed that inoculation with unfamiliar bacteria prompted strong immune responses in Culex. The worm and virus pathogens that the mosquitoes transmit naturally provoked little immune activation, however, suggesting that tolerance has evolved to any damage caused by replication of the pathogens in the insects.

Abstract

Culex quinquefasciatus (the southern house mosquito) is an important mosquito vector of viruses such as West Nile virus and St. Louis encephalitis virus, as well as of nematodes that cause lymphatic filariasis. C. quinquefasciatus is one species within the Culex pipiens species complex and can be found throughout tropical and temperate climates of the world. The ability of C. quinquefasciatus to take blood meals from birds, livestock, and humans contributes to its ability to vector pathogens between species. Here, we describe the genomic sequence of C. quinquefasciatus: Its repertoire of 18,883 protein-coding genes is 22% larger than that of Aedes aegypti and 52% larger than that of Anopheles gambiae with multiple gene-family expansions, including olfactory and gustatory receptors, salivary gland genes, and genes associated with xenobiotic detoxification.

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Supplementary Material

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References and Notes

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Information & Authors

Information

Published In

Science
Volume 330 | Issue 6000
1 October 2010

Submission history

Received: 5 May 2010
Accepted: 27 August 2010
Published in print: 1 October 2010

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Acknowledgments

This work was supported by NIH grant HHSN266200400039C and by the National Institute of Allergy and Infectious Diseases, NIH, Department of Health and Human Services under contract numbers N01-AI-30071 and HHSN266200400001C. The assembled genome was deposited in the GenBank database with accession number AAWU00000000.

Authors

Affiliations

Peter Arensburger* [email protected]
Center for Disease Vector Research, University of California Riverside, Riverside, CA 92521, USA.
Karine Megy
European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Robert M. Waterhouse
University of Geneva Medical School, 1 rue Michel-Servet, 1211 Geneva, Switzerland.
Swiss Institute of Bioinformatics, 1 rue Michel-Servet, 1211 Geneva, Switzerland.
Jenica Abrudan
University of Notre Dame, Notre Dame, IN 46556, USA.
Paolo Amedeo
J. Craig Venter Institute, Rockville, MD 20850, USA.
Beatriz Antelo
Complexo Hospitalario Universitario de Santiago, Santiago de Compostela 15706, Spain.
Lyric Bartholomay
Iowa State University, Ames, IA 50011, USA.
Shelby Bidwell
Center for Genomic Regulation, Universitat Pompeu Fabra, E-08003 Barcelona, Catalonia, Spain.
Elisabet Caler
J. Craig Venter Institute, Rockville, MD 20850, USA.
Francisco Camara
Center for Genomic Regulation, Universitat Pompeu Fabra, E-08003 Barcelona, Catalonia, Spain.
Corey L. Campbell
Colorado State University, Fort Collins, CO 80523, USA.
Kathryn S. Campbell
Harvard University, Cambridge, MA 02138, USA.
Claudio Casola
Indiana University, Bloomington, IN 47405–3700, USA.
Marta T. Castro
Programa d’Epigenética i Biologia del Cáncer, Hospital Duran i Reynals, 08907 Hospitalet de Llobregat, Barcelona, Spain.
Ishwar Chandramouliswaran
J. Craig Venter Institute, Rockville, MD 20850, USA.
Sinéad B. Chapman
The Broad Institute, Cambridge, MA 02142, USA.
Scott Christley
University of Notre Dame, Notre Dame, IN 46556, USA.
Javier Costas
Fundación Pública Galega de Medicina Xenómica–Servizo Galego de Saúde, Santiago de Compostela 15706, Spain.
Eric Eisenstadt
J. Craig Venter Institute, Rockville, MD 20850, USA.
Cedric Feschotte
University of Texas Arlington, Arlington, TX 76019, USA.
Claire Fraser-Liggett
Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Roderic Guigo
Center for Genomic Regulation, Universitat Pompeu Fabra, E-08003 Barcelona, Catalonia, Spain.
Brian Haas
The Broad Institute, Cambridge, MA 02142, USA.
Martin Hammond
European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Bill S. Hansson
Max Planck Institute for Chemical Ecology, 07749 Jena, Germany.
Janet Hemingway
Liverpool School of Tropical Medicine, Liverpool L3 5QA, UK.
Sharon R. Hill
Swedish University of Agricultural Sciences, 230 53 Alnarp, Sweden.
Clint Howarth
The Broad Institute, Cambridge, MA 02142, USA.
Rickard Ignell
Swedish University of Agricultural Sciences, 230 53 Alnarp, Sweden.
Ryan C. Kennedy
University of Notre Dame, Notre Dame, IN 46556, USA.
Chinnappa D. Kodira
454 Life Sciences, the Roche Group, Branford, CT 06405, USA.
Neil F. Lobo
University of Notre Dame, Notre Dame, IN 46556, USA.
Chunhong Mao
Virginia Polytechnic Institute and State University, Blacksburg, VA 24061, USA.
George Mayhew
University of Wisconsin, Madison, WI 53706, USA.
Kristin Michel
Kansas State University, Manhattan, KS 66506, USA.
Akio Mori
University of Notre Dame, Notre Dame, IN 46556, USA.
Nannan Liu
Auburn University, Auburn, AL 36849, USA.
Horacio Naveira
Departamento de Biloxía Celular e Molecular, Universidade da Coruña, 15071 A, Coruña, Spain.
Vishvanath Nene
Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201, USA.
International Livestock Research Institute, Nairobi, Kenya.
Nam Nguyen
University of Texas Arlington, Arlington, TX 76019, USA.
Matthew D. Pearson
The Broad Institute, Cambridge, MA 02142, USA.
Ellen J. Pritham
University of Texas Arlington, Arlington, TX 76019, USA.
Daniela Puiu
Center for Bioinformatics and Computational Biology, University of Maryland, College Park, MD 20742, USA.
Yumin Qi
Virginia Polytechnic Institute and State University, Blacksburg, VA 24061, USA.
Hilary Ranson
Liverpool School of Tropical Medicine, Liverpool L3 5QA, UK.
Jose M. C. Ribeiro
National Institutes of Health, Bethesda, MD 20892, USA.
Hugh M. Roberston
University of Illinois Urbana-Champaign, Urbana, IL 61801, USA.
David W. Severson
University of Notre Dame, Notre Dame, IN 46556, USA.
Martin Shumway
National Institutes of Health, Bethesda, MD 20892, USA.
Mario Stanke
University of Göttingen, 37077 Göttingen, Germany.
Robert L. Strausberg
J. Craig Venter Institute, Rockville, MD 20850, USA.
Cheng Sun
University of Texas Arlington, Arlington, TX 76019, USA.
Granger Sutton
J. Craig Venter Institute, Rockville, MD 20850, USA.
Zhijian (Jake) Tu
Virginia Polytechnic Institute and State University, Blacksburg, VA 24061, USA.
Jose Manuel C. Tubio
Complexo Hospitalario Universitario de Santiago, Santiago de Compostela 15706, Spain.
Maria F. Unger
University of Notre Dame, Notre Dame, IN 46556, USA.
Dana L. Vanlandingham
Imperial College London, South Kensington Campus, London SW7 2AZ, UK.
Albert J. Vilella
European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Owen White
Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Jared R. White
The Broad Institute, Cambridge, MA 02142, USA.
Charles S. Wondji
Liverpool School of Tropical Medicine, Liverpool L3 5QA, UK.
Jennifer Wortman
Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Evgeny M. Zdobnov
University of Geneva Medical School, 1 rue Michel-Servet, 1211 Geneva, Switzerland.
Swiss Institute of Bioinformatics, 1 rue Michel-Servet, 1211 Geneva, Switzerland.
Imperial College London, South Kensington Campus, London SW7 2AZ, UK.
Bruce Birren
The Broad Institute, Cambridge, MA 02142, USA.
Bruce M. Christensen
University of Wisconsin, Madison, WI 53706, USA.
Frank H. Collins
University of Notre Dame, Notre Dame, IN 46556, USA.
Anthony Cornel
University of Texas Medical Branch, Galveston, TX 77555, USA.
George Dimopoulos
Bloomberg School of Public Health, Johns Hopkins University, Baltimore, MD 21205, USA.
Linda I. Hannick
J. Craig Venter Institute, Rockville, MD 20850, USA.
Stephen Higgs
Imperial College London, South Kensington Campus, London SW7 2AZ, UK.
Gregory C. Lanzaro
University of California Davis, Parlier, CA 93648, USA.
Daniel Lawson
European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Norman H. Lee
George Washington University Medical Center, Washington, DC 20037, USA.
Marc A. T. Muskavitch
The Broad Institute, Cambridge, MA 02142, USA.
Boston College, Chestnut Hill, MA 02467, USA.
Harvard School of Public Health, Boston, MA 02115, USA.
Alexander S. Raikhel
Center for Disease Vector Research, University of California Riverside, Riverside, CA 92521, USA.
Peter W. Atkinson
Center for Disease Vector Research, University of California Riverside, Riverside, CA 92521, USA.

Notes

*
To whom correspondence should be addressed. E-mail: [email protected]

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